DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and lbx1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001072559.1 Gene:lbx1 / 780014 XenbaseID:XB-GENE-6455157 Length:265 Species:Xenopus tropicalis


Alignment Length:275 Identity:57/275 - (20%)
Similarity:93/275 - (33%) Gaps:72/275 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 LDVYSPQSQTQKLKNGDFATPPPTTPTSL---------------------------PPLEGI--- 205
            ||:..|.:.:.|          |.||.|:                           ||..|:   
 Frog    20 LDLLPPPANSNK----------PLTPFSIEDILNKPSVRRSYTICGTAHLLSTAEKPPAAGLPLS 74

  Fly   206 ------STPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRY 264
                  .|.|....|:.:|...:.:...::.|..|..........:|    .|..:::|..:|.:
 Frog    75 SRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQT----PKKRRKSRTAFTNH 135

  Fly   265 QTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAM 329
            |..||||.|.:.:|::...|..||..|.|:..|:..||||||.|.|:|             ...|
 Frog   136 QIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD-------------LEEM 187

  Fly   330 LPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYPQQYQ 394
            ...:|:....:.......:.:....:.|.:....|.|.|...||....|...:.      |...|
 Frog   188 KADVESVKKMSPSTVEAVLTISELEEETNSVRDDSRSRSPQLGLSGHMPLSPSS------PLTEQ 246

  Fly   395 H---QCSYQQHPQDL 406
            |   :||..:...::
 Frog   247 HTSKECSEDEEDVEI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 18/112 (16%)
Homeodomain 255..311 CDD:459649 22/55 (40%)
KLF1_2_4_N <321..404 CDD:425360 14/85 (16%)
lbx1NP_001072559.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 4/22 (18%)
Homeodomain 126..182 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..265 12/56 (21%)

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