DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Barx2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:183 Identity:47/183 - (25%)
Similarity:72/183 - (39%) Gaps:48/183 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 ASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQE---IN 225
            :.|..||.:..|..|..            |:......||...:..|........|.::::   |:
  Rat    32 SKETCDYFEKLSLYSVC------------PSLVVRPKPLHSCTGSPSLRAYPLLSVITRQPTVIS 84

  Fly   226 HRIVTAPNGAGDFNWSHI----------------------EETLASD----------CKDSKRTR 258
            |.:.|.| |....|..|.                      .|.|||.          .|..:|:|
  Rat    85 HLVPTGP-GLTPVNTRHAVAAEAAAAAAAAAAAAAAETPGGEALASSESETEQPTPRQKKPRRSR 148

  Fly   259 QTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            ..:|..|.:.|||:|...:|::...|:|:|.:|.|::.|:|.|:||||||.||
  Rat   149 TIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 18/108 (17%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360
Barx2NP_001414382.1 None
Blue background indicates that the domain is not in the aligned region.

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