Protein Alignment ftz and Vax1

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_072158.1
• Gene: Vax1 / 64571
• RGDID: 621132
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 181
• Identity: 58/181 - (32%)
• Similarity: 78/181 - (43%)
• Gaps: 54/181 - (29%)

  Fly   209 PQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDS---------------KRTR 258
            ||  |..|:|..|::.|.   :..|.:.|.:  :....|..|.|.|               ||||
  Rat    47 PQ--GAFSASGASEDCNK---SKSNSSADPD--YCRRILVRDAKGSIREIILPKGLDLDRPKRTR 104

  Fly   259 QTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDS------ 317
            .::|..|...||.||...:|:..|.|.::|..|:|||.|:|:||||||.|.|||:..||
  Rat   105 TSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVV 169

  Fly   318 -------------------SPEHCGAGYTAMLPPLE--ATSTATTGAPSVP 347
                               ||    .|..|:|||..  |..:|..| ||:|
  Rat   170 SETAATCSVLRLLEQGRLLSP----PGLPALLPPCATGALGSALRG-PSLP 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	9/38 (24%)
		Homeodomain	255..311	CDD:459649	27/55 (49%)
		KLF1_2_4_N	<321..404	CDD:425360	11/29 (38%)
Vax1	NP_072158.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..39
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	50..69		5/21 (24%)
		vax upstream domain	72..99		4/28 (14%)
		homeobox	100..159		29/58 (50%)
		Homeodomain	101..157	CDD:459649	27/55 (49%)
		vax downstream domain	178..189		0/10 (0%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	236..267
		vax terminal domain	315..323