DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and hoxb10a

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571616.1 Gene:hoxb10a / 58056 ZFINID:ZDB-GENE-000328-2 Length:279 Species:Danio rerio


Alignment Length:313 Identity:81/313 - (25%)
Similarity:136/313 - (43%) Gaps:67/313 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YYQNTSNYQGYYP---QESYSESCYYYNN--QEQVTTQTVPPV-QPTTPPPKATKRKAEDDAASI 98
            :....:::.|..|   |..:..:|.:.::  :|.....|:.|. |...|...:...:...|..|:
Zfish     8 FVHGAASWDGEQPSPVQLPHISACPFTSSGRKEDPFYFTLDPTGQARQPLDISAFSRIMTDMGSL 72

  Fly    99 IAAVEERPST-------LRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEY 156
            .:|.:.||.|       |.:|.||             |..|    :|::|     |.:.|.....
Zfish    73 NSADDHRPETSFYSGHKLLSLNTN-------------TDPE----SPSLS-----SHSDSQHLHS 115

  Fly   157 VTVPTPSA----SEDVDYLDVYS---PQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQ-SPG 213
            :::..|.:    ..|:.||.:.|   |...::...|....|....:..|...:|..:.... :.|
Zfish   116 LSLSAPCSETDNKHDMQYLAMESTKYPSQWSESRTNRSIITTLSISQRSKDDIEPNNLQTDFTRG 180

  Fly   214 EKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRY 278
            :|:....:|::.  :..|.||     |        ...|..::.|..|:::|.|||||||.||.|
Zfish   181 DKTPREKTQDVT--LENAANG-----W--------LSAKAGRKKRCPYSKHQILELEKEFLFNMY 230

  Fly   279 ITRRRRIDIANALSLSERQIKIWFQNRRMKSKK----DRTLDSSPEHCGAGYT 327
            :||.||::|:.:::|::||:||||||||||.||    .||.|.     |..:|
Zfish   231 LTRERRLEISRSINLTDRQVKIWFQNRRMKLKKMTREHRTRDP-----GTSFT 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 42/228 (18%)
Homeodomain 255..311 CDD:459649 31/55 (56%)
KLF1_2_4_N <321..404 CDD:425360 2/7 (29%)
hoxb10aNP_571616.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..187 3/19 (16%)
Homeodomain 207..263 CDD:459649 31/55 (56%)

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