DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and hoxa4a

DIOPT Version :9

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571610.1 Gene:hoxa4a / 58050 ZFINID:ZDB-GENE-000823-4 Length:245 Species:Danio rerio


Alignment Length:275 Identity:87/275 - (31%)
Similarity:118/275 - (42%) Gaps:81/275 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 YTP---DYFYTTVEQVKKAPAVSTKVTAS-PAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQK 182
            |.|   ||:     :..|.|.......|| |..:|.::.......|.::..|:.|.:..|.|:..
Zfish    28 YMPVSSDYY-----ERPKDPGFPHHEEASYPRSNYQEQSYDYGNVSTNDLNDFSDRHHAQPQSVS 87

  Fly   183 LKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAV------SQEINHRIVTAPNGAGDFNWS 241
            ..:|    |..||.:.:          .|.|.|..|.|      ||:....:|        :.|.
Zfish    88 QNHG----PRLTTESCV----------GSDGNKDCSLVSDALPGSQKSKEPVV--------YPWM 130

  Fly   242 ---HIEETLASDCKD-SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWF 302
               |:....||.... .||:|..|||.|.||||||||||||:|||||::||:.:.|||||:||||
Zfish   131 KKVHVNTVTASYSGGVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWF 195

  Fly   303 QNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSH 367
            ||||||.|||..|.::             .:.::|:|         |..||.:|.|.        
Zfish   196 QNRRMKWKKDHKLPNT-------------KIRSSSSA---------PSNHHVKTDAT-------- 230

  Fly   368 SHGYGLLNDYPQQQT 382
                      .||||
Zfish   231 ----------QQQQT 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:281812 29/138 (21%)
Homeobox 257..310 CDD:278475 39/52 (75%)
hoxa4aNP_571610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..99 17/73 (23%)
Antp-type hexapeptide 126..131 2/12 (17%)
Homeobox 150..203 CDD:278475 39/52 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..245 13/71 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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