DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and meox2a

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:173 Identity:55/173 - (31%)
Similarity:76/173 - (43%) Gaps:48/173 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 TPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPL-----EGISTPP--------QSP 212
            :|||:.....|.:..|.|.:..:..|.     |:...|.|.|     .|.|..|        .||
Zfish    98 SPSAAGVRLGLGISGPDSGSSDVGPGG-----PSLCASTPSLGAGVPSGASCVPGGDFGRHTMSP 157

  Fly   213 GE--------KSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQT-YTRYQTLE 268
            .|        :|.|:.||:.|::                     ||.....|..:| :|:.|..|
Zfish   158 AEAEKRNSKRRSDSSESQDGNYK---------------------SDVSSKPRKERTAFTKEQIRE 201

  Fly   269 LEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            ||.||..:.|:||.||.:||..|.|:|||:|:||||||||.|:
Zfish   202 LEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 22/107 (21%)
Homeodomain 255..311 CDD:459649 30/56 (54%)
KLF1_2_4_N <321..404 CDD:425360
meox2aXP_017206696.1 Homeodomain 188..244 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

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