Protein Alignment ftz and Hoxb6

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001385781.1
• Gene: Hoxb6 / 497986
• RGDID: 1562142
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 197
• Identity: 73/197 - (37%)
• Similarity: 89/197 - (45%)
• Gaps: 39/197 - (19%)

  Fly   146 ASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLP---------- 200
            |.|...|...|  .|.|...:.......|.|       ..|.:....|......|
  Rat    33 ADPLRHYPAPY--GPGPGQDKGFAASSYYPP-------AGGGYGRAAPCDYGPAPAFYREKDAAC 88

  Fly   201 PLEGISTPPQSPGEKSSSAVSQ------EINHRIVTAPNGAGDFNWSHIEETLASDCKDS----- 254
            .|.|...||....|...|..:|      |...:..:.|    .:.|..    ..:.|..|
  Rat    89 ALSGADEPPPFHPEPRKSDCAQDKSVFGETEEQKCSTP----VYPWMQ----RMNSCNSSSFGPS 145

  Fly   255 -KRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSS 318
             :|.|||||||||||||||||:|||:||||||:||:||.|:||||||||||||||.||:..|.|:
  Rat   146 GRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSA 210

  Fly   319 PE 320
            .:
  Rat   211 SQ 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	21/117 (18%)
		Homeodomain	255..311	CDD:459649	46/55 (84%)
		KLF1_2_4_N	<321..404	CDD:425360	73/197 (37%)
Hoxb6	NP_001385781.1	Homeodomain	147..203	CDD:459649	46/55 (84%)