DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Hoxb7

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001017480.1 Gene:Hoxb7 / 497985 RGDID:1559918 Length:219 Species:Rattus norvegicus


Alignment Length:115 Identity:61/115 - (53%)
Similarity:76/115 - (66%) Gaps:19/115 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LEGI--STPPQSPG--EKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYT 262
            |.|:  ..|.::.|  |:..|.::.|.|.||         :.|      :.|...:.||.|||||
  Rat    96 LSGVCPGDPAKAAGAKEQRDSDLAAESNFRI---------YPW------MRSSGTERKRGRQTYT 145

  Fly   263 RYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD 312
            ||||||||||||:|||:||||||:||:||.|:||||||||||||||.||:
  Rat   146 RYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 11/49 (22%)
Homeodomain 255..311 CDD:459649 47/55 (85%)
KLF1_2_4_N <321..404 CDD:425360
Hoxb7NP_001017480.1 Antp-type hexapeptide 126..131 2/19 (11%)
Homeodomain 138..194 CDD:459649 47/55 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..219 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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