Protein Alignment ftz and hoxa1

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 171
• Identity: 61/171 - (35%)
• Similarity: 81/171 - (47%)
• Gaps: 22/171 - (12%)

  Fly   208 PPQ--SPGEKSSSAVSQEINHRIV-------TAPNGAGDFNWSHIEETLASDCK--------DSK 255
            |.|  |....:::..|..|:.|.|       |:|..|..|:|..::.......|        ...
 Frog   154 PDQNISVANYNNNVSSLHISQREVCRSPSSETSPGPAQTFDWMKVKRNPPKTGKAGEYGFAGQPN 218

  Fly   256 RTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSK---KDRTLDS 317
            ..|..:|..|..|||||||||:|:||.||::||.||.|:|.|:||||||||||.|   |:..|..
 Frog   219 TARTNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPI 283

  Fly   318 SPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTA 358
            ||. ...|.......|...|.::..||| |......|.:|:
 Frog   284 SPS-ASTGSDEKSEELSEKSNSSPCAPS-PASSTSDHLSTS 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	12/48 (25%)
		Homeodomain	255..311	CDD:459649	35/58 (60%)
		KLF1_2_4_N	<321..404	CDD:425360	9/38 (24%)
hoxa1	NP_001008017.1	Homeodomain	221..274	CDD:459649	34/52 (65%)