DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and Dr

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:467 Identity:95/467 - (20%)
Similarity:150/467 - (32%) Gaps:180/467 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATTNSQSHYSYADNMNMYNMYHPH--SLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYY 63
            :.:::|.|..:...||:..||...:  :|.|::  .:|.||....||........:.:....:..
  Fly    36 ITSSSSNSGSNSGSNMSSGNMTSSNLTNLSPSH--PAGLNALASPTSPSALLLAHQQHLLQQHQQ 98

  Fly    64 NNQEQVTTQTVPPVQ-PTTPPP-----KATKRKAEDDAASIIAAVEERPST------------LR 110
            :.|:|...|....:| ....||     |.|.|.:....||::|  :.||.|            ..
  Fly    99 HQQQQQQQQQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLA--DTRPRTPPNQAADGPQNLTS 161

  Fly   111 ALLTNPVKKLKYTP-------------DYFYTTV-----------------------------EQ 133
            :..|:|:.:...||             :.|:...                             :|
  Fly   162 SAATSPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQ 226

  Fly   134 VKKA------PAVSTKVTASPAP--------------------------------SYDQEYVTVP 160
            .::|      |..||..|.|..|                                .||:|.:...
  Fly   227 QQQADARANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDH 291

  Fly   161 TPSASED----VDYLDVYSPQSQTQKLKNGDFATPPPTTPTSL----PPLEGISTPPQSPGEKSS 217
            .....|:    ||..|:.:..|             |.:||..|    ..||....||  ||....
  Fly   292 EADHDEEEDSIVDIEDMNADDS-------------PRSTPDGLDGSGKSLESPHGPP--PGSHMQ 341

  Fly   218 SAV-------SQEINHR------IVTA-----------------------PNG-------AGDFN 239
            |.:       |..:..|      :..|                       |.|       .||.|
  Fly   342 STILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPGAGFGGDAN 406

  Fly   240 WSHIEETLASDC-----KDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIK 299
                 |.....|     |.:::.|..:|..|.|.|||:|...:|::...|.:.:::|.|:|.|:|
  Fly   407 -----EPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVK 466

  Fly   300 IWFQNRRMKSKK 311
            |||||||.|:|:
  Fly   467 IWFQNRRAKAKR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 69/397 (17%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360
DrNP_477324.1 Homeodomain 422..478 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.