DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and MSX1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_002439.2 Gene:MSX1 / 4487 HGNCID:7391 Length:303 Species:Homo sapiens


Alignment Length:238 Identity:58/238 - (24%)
Similarity:86/238 - (36%) Gaps:71/238 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 PPTTPTSLPPLEGI----------STPPQSPGEKSSSAVSQEINHRIV--------------TAP 232
            |....::|.|.||:          ..||.|.|...:.:..:.:.|..|              .:|
Human    73 PGAKESALAPSEGVQAAGGSAQPLGVPPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALVKAESP 137

  Fly   233 NGAGDFNWSHIEE--------------TLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRR 283
            .......|.....              ||... |.:::.|..:|..|.|.||::|...:|::...
Human   138 EKPERTPWMQSPRFSPPPARRLSPPACTLRKH-KTNRKPRTPFTTAQLLALERKFRQKQYLSIAE 201

  Fly   284 RIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPL----------EATST 338
            |.:.:::|||:|.|:||||||||.|:|  |..::..|........||||.          .|...
Human   202 RAEFSSSLSLTETQVKIWFQNRRAKAK--RLQEAELEKLKMAAKPMLPP
AAFGLSFPLGGPAAVA 264

  Fly   339 ATTGA--------------PSVPVPMYHHHQTTAAYPAYSHSH 367
            |..||              |..||.:|      .|:..||..|
Human   265 AAAGASLYGASGPFQRAALPVAPVGLY------TAHVGYSMYH 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 14/93 (15%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360 16/71 (23%)
MSX1NP_002439.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..117 9/43 (21%)
PTZ00449 <105..>248 CDD:185628 35/145 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..174 5/41 (12%)
Homeodomain 173..229 CDD:459649 24/57 (42%)
Blue background indicates that the domain is not in the aligned region.

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