DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and zfh2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster


Alignment Length:83 Identity:19/83 - (22%)
Similarity:34/83 - (40%) Gaps:18/83 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 PKTRELEAKLQ----------SVAQSMSASSTLDRPSKNGNNGQYYRDQTAPPEFHEELDVRQSR 591
            |:..|.:.||:          .|.|:.   :..|:..::.|:..|......|..|.||||     
  Fly    83 PENPERKRKLKLIRNYCDGIVYVTQNF---TECDKKLESKNSTCYSAWDPFPENFEEELD----- 139

  Fly   592 DKSKKAPTEKRDRSFFGE 609
            :..||...::..:.:||:
  Fly   140 ENKKKQMLQENCKDYFGK 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787
Homeodomain 255..311 CDD:459649
KLF1_2_4_N <321..404 CDD:425360
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
Homeodomain 1798..1857 CDD:459649
Homeodomain 2155..2211 CDD:459649
Homeodomain 2761..2817 CDD:459649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.