DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and zfh1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:451 Identity:99/451 - (21%)
Similarity:141/451 - (31%) Gaps:165/451 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEE 104
            ::||..:      :|...:|  :.|||   .....||: |.            |..||:..  |:
  Fly   746 WFQNNRS------RERKMQS--FQNNQ---AAGAAPPM-PI------------DSQASLTR--ED 784

  Fly   105 RPSTLRALLTNPVKKLKYTPDYF------YTTVEQVKKAPAVSTKVTASPA---PS-----YDQE 155
            :|..|.........|.:.:|.|.      ....|.:..:...||..:.|||   ||     |   
  Fly   785 QPLDLSVKRDPLTPKSESSPPYIAPPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALY--- 846

  Fly   156 YVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFA---TPPPTTPTSLPPLEGISTPPQSPGEKSS 217
            :...|.||           .|.||.........|   .||...|.|| |:|.:.  ...||...:
  Fly   847 FGAAPPPS-----------PPNSQLDSTPRSGQAFPGLPPYMLPMSL-PMEALF--KMRPGGDFA 897

  Fly   218 SAVSQEINHRIVT------------APNGAGDFNW-------SHIEE------------------ 245
            |      ||.::.            :|.|:...:|       ||.:|                  
  Fly   898 S------NHALMNSIKLPDYRGTSLSPGGSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAET 956

  Fly   246 ----------TLASDC-----KDSKRTRQTYTR-----YQTLELEKEFHFNRYITRRRRID---- 286
                      .:...|     |.|...|..|..     ||.:|..|.|....::|..:|:.    
  Fly   957 HGHAGDPDLPYVCDQCDKAFAKQSSLARHKYEHSGQRPYQCIECPKAFKHKHHLTEHKRLHSGEK 1021

  Fly   287 ----------IANALSLSERQIKIWFQNRR---MKSKKDRTLDSS-PEHCGAGYTAMLPPLEATS 337
                      .:::.|.|:.      .|.|   .|..::...|:| |..|..|...:.||..|::
  Fly  1022 PFQCSKCLKRFSHSGSYSQH------MNHRYSYCKPYREXVSDTSVPPTCQPGANPLAPPAMASN 1080

  Fly   338 TATTGAPSVPVPMYHHHQTTAAYPAYS--HSHSHGYGLLNDYPQQQTHQQYDAYPQQYQHQ 396
               .|...|.||        |..|.|:  |.|.|...|......||.|||     ||.|||
  Fly  1081 ---RGRRRVQVP--------AGNPPYTPHHQHPHHPHLAAMAAFQQQHQQ-----QQQQHQ 1125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 53/271 (20%)
Homeodomain 255..311 CDD:459649 14/77 (18%)
KLF1_2_4_N <321..404 CDD:425360 26/78 (33%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 3/15 (20%)
C2H2 Zn finger 969..989 CDD:275368 5/19 (26%)
zf-H2C2_2 981..1006 CDD:463886 7/24 (29%)
C2H2 Zn finger 997..1017 CDD:275368 5/19 (26%)
zf-H2C2_2 1009..1034 CDD:463886 2/24 (8%)
C2H2 Zn finger 1025..1042 CDD:275368 2/22 (9%)
Blue background indicates that the domain is not in the aligned region.

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