Protein Alignment ftz and Scr

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 447
• Identity: 108/447 - (24%)
• Similarity: 160/447 - (35%)
• Gaps: 151/447 - (33%)

  Fly    20 NMYHP--HSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTP 82
            |.|.|  .:..|..|.|: ..|:|.|.:.|.|             ..|.:.|....:.|.:....
  Fly    73 NDYFPAAAAYTPNLYPNT-PQAHYANQAAYGG-------------QGNPDMVDYTQLQPQRLLLQ 123

  Fly    83 PPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTAS 147
            ..:..:::....||:.:||.:::.   .|...:|.:             :|.::...:|.|....
  Fly   124 QQQQQQQQQHAHAAAAVAAQQQQQ---LAQQQHPQQ-------------QQQQQQANISCKYAND 172

  Fly   148 P--------------------APSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQK---------- 182
            |                    |.|.:....::.:|......|.....||.|..:.
  Fly   173 PVTPGGSGGGGVSGSNNNNNSANSNNNNSQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVL 237

  Fly   183 ------------LKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGA 235
                        |.|....:.....|.:      ::.|..|||...|.:.|...|....:..:|.
  Fly   238 GGSLAAAAAAAGLNNNHSGSGVSGGPGN------VNVPMHSPGGGDSDSESDSGNEAGSSQNSGN 296

  Fly   236 GDFN------WS---HIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANAL 291
            |..|      |.   |:..:..:...::||.|.:||||||||||||||||||:||||||:||:||
  Fly   297 GKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 361

  Fly   292 SLSERQIKIWFQNRRMKSKKDRTLDSS---PEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHH 353
            .|:||||||||||||||.||:..:.|.   |.|.|
  Fly   362 CLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMG------------------------------ 396

  Fly   354 HQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYPQQYQHQCSYQQHPQDLYHLS 410
                    .|.|                .:.|:|.:|.|:.|..:     .|.:|.|
  Fly   397 --------PYGH----------------PYHQFDIHPSQFAHLSA-----XDAWHFS 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	46/280 (16%)
		Homeodomain	255..311	CDD:459649	46/55 (84%)
		KLF1_2_4_N	<321..404	CDD:425360	9/82 (11%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	46/55 (84%)