Protein Alignment ftz and nkx1.2la

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_997995.2
• Gene: nkx1.2la / 405755
• ZFINID: ZDB-GENE-040615-1
• Length: 270
• Species: Danio rerio
• Alignment Length: 265
• Identity: 66/265 - (24%)
• Similarity: 97/265 - (36%)
• Gaps: 83/265 - (31%)

  Fly   160 PTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEI 224
            ||...|:..|    .|.:.:|...:|..|.:           ||.......|.||..|:....:.
Zfish    27 PTKFTSKKTD----VSEKERTSSSENTGFGS-----------LEESRNGKHSDGECESTGDRSDD 76

  Fly   225 NHRIVT--APNGAGDFNWSHIEETLAS---------------------------------DCKDS 254
            .|..|.  .|:...||:.|....:|.|                                 .|...
Zfish    77 RHGCVRLHPPDPDVDFDCSSSHRSLKSGFSPCEDPDEAAEERMTPAPDDVSRQRRRRSDHSCAKP 141

  Fly   255 KRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD------- 312
            :|.|..:|..|.:.||.:|...||::...|:::|.:|||:|.|:||||||||.|.||.
Zfish   142 RRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGVESS 206

  Fly   313 -----RTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHSHSHGYG 372
                 .:|.:....||:. :|:.||.   ||......|.||     |..::|            |
Zfish   207 LQAGTNSLPNISPSCGSA-SALHPPF---STGNMIFHSGPV-----HLASSA------------G 250

  Fly   373 LLNDY 377
            ||:.:
Zfish   251 LLHPF 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	20/89 (22%)
		Homeodomain	255..311	CDD:459649	25/55 (45%)
		KLF1_2_4_N	<321..404	CDD:425360	15/57 (26%)
nkx1.2la	NP_997995.2	Homeodomain	142..198	CDD:459649	25/55 (45%)