DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and exex

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:251 Identity:63/251 - (25%)
Similarity:110/251 - (43%) Gaps:51/251 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 AEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPS---- 151
            |...|||....:.|:.:         :::::.:.:|...:.:.:.::.:.::...:||..|    
  Fly   271 AAQAAASAAGGISEQEA---------LQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCE 326

  Fly   152 ---------------------YDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTT 195
                                 :|:....:|..|.....|: .:|:.....|.|..|..|...|..
  Fly   327 DQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDF-PLYAGGHPYQLLAQGGSAFHRPLD 390

  Fly   196 PTSLP---PLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRT 257
            |:..|   |:.....|.|...|..:.|  ..::|||   |..|...:.:.:.:|        :|.
  Fly   391 PSGKPIPIPMGHNFMPSQLQFEFLARA--GMLHHRI---PELAAYPHHAILGKT--------RRP 442

  Fly   258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDR 313
            |..:|..|.|||||:|..|:|::|.:|.::|:.|.|||.|:||||||||||.|:.:
  Fly   443 RTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 32/184 (17%)
Homeodomain 255..311 CDD:459649 30/55 (55%)
KLF1_2_4_N <321..404 CDD:425360
exexNP_648164.1 Homeodomain 440..496 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

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