DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and PHDP

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:115 Identity:36/115 - (31%)
Similarity:57/115 - (49%) Gaps:19/115 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 SSSAVSQEINH-------RIVT------APNGAGDFNW-----SHIEETLA-SDCKDSKRTRQTY 261
            :.||:...:|.       :|.|      |.:..|.:|.     |:.::.|: :|....:|.|.|:
  Fly    55 NESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTF 119

  Fly   262 TRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            |..|..||||.|....|.....|.:||:.|.|:|.::::||||||.|.:|
  Fly   120 TSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRK 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 9/49 (18%)
Homeodomain 255..311 CDD:459649 24/55 (44%)
KLF1_2_4_N <321..404 CDD:425360
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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