Protein Alignment ftz and Rx

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_726006.3
• Gene: Rx / 37367
• FlyBaseID: FBgn0020617
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 514
• Identity: 110/514 - (21%)
• Similarity: 169/514 - (32%)
• Gaps: 164/514 - (31%)

  Fly    23 HPHSLPPTYYDNSGSNAYYQNTSNY----QGY-YPQESYSESCYYYNNQEQVT----TQT----- 73
            |.|   ||::.::...  |.|...:    .|| :|:|:...   |.|:..|:.    .||
  Fly   258 HGH---PTHHGHAPFG--YHNAFGFGQGGHGYGHPEEAAGN---YLNSMHQMVEANQLQTGANGA 314

  Fly    74 VPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAP 138
            .||  |...||.:.....:..||....|.|::....:...::|.......|...|....|
  Fly   315 NPP--PAPLPPSSFGSHQQHLAALAAQAQEQQNQHSKYAKSSPTGAGPPPPPGAYFMESQ----- 372

  Fly   139 AVSTKVTASPAPS---YDQEYVTVPTPSASEDVD----YLDVYSPQSQT---------------- 180
                  ||..|||   ||:..::..:....:|.|    .|||.||.:.:
  Fly   373 ------TAPVAPSQINYDERSMSSASDLEEDDDDAAKLQLDVTSPPTPSPRGQLAAKRKSAGVFC 431

  Fly   181 ----QKLKNGDFATPPPTTPTSLPP--LEGISTPPQS---------------------------- 211
                .||.||..    |.....:.|  :|.:....||
  Fly   432 DDNEPKLANGQL----PGGNYGIRPRSMEEVHHQQQSHHHQQQQQQQQQQQQLQQQQGFQHDFRN 492

  Fly   212 ------PGEKSSSAVSQEINHRIVTAPNG----AGDFNWSHIEE-----TLASD-------C--K 252
                  .|..:|....:.:|....:..||    :.|.|.::..|     |..||       |  |
  Fly   493 SGNGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSDDEGQDDNCAKK 557

  Fly   253 DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDS 317
            ..:|.|.|:|.||..|||:.|..:.|.....|.::|..::|.|.::::||||||.|.::....:|
  Fly   558 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKSES 622

  Fly   318 ----------SPEHCGAGYTA------MLPPLEATSTATTGAPSVPVPMY--------HHHQTTA 358
                      .|...|.|.:.      :.|||.:........|....|.|        ..:.|.:
  Fly   623 LRLGLTHFTQLPHRLGCGASGLPVDPWLSPPLLSALPGFLSHPQTVYPSYLTPPLSLAPGNLTMS 687

  Fly   359 AYPAYSHSHSH--------GYGLLNDYPQQQTHQQYDAYPQQYQHQCSYQQHPQDLYHL 409
            :..|..|.|:|        |:|         .|.|....|....|..   .||...:|:
  Fly   688 SLAAMGHHHAHNGPPPPHVGHG---------GHGQPQPPPPPPPHGV---PHPHGSHHV 734

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	60/310 (19%)
		Homeodomain	255..311	CDD:459649	22/55 (40%)
		KLF1_2_4_N	<321..404	CDD:425360	20/104 (19%)
Rx	NP_726006.3	Homeodomain	560..616	CDD:459649	22/55 (40%)
		OAR	876..892	CDD:461067