DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and PDX1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_000200.1 Gene:PDX1 / 3651 HGNCID:6107 Length:283 Species:Homo sapiens


Alignment Length:270 Identity:82/270 - (30%)
Similarity:110/270 - (40%) Gaps:76/270 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 YTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVD-YLDVYSPQSQTQ-------KLK 184
            |....|:.|.|....:   .|||.:          |||.... |:....|.....       .|:
Human     7 YYAATQLYKDPCAFQR---GPAPEF----------SASPPACLYMGRQPPPPPPHPFPGALGALE 58

  Fly   185 NGDFATPPPTTPTSLPPLE----------------GISTPPQSP-GEKSSSAVSQEINHRIVTAP 232
            .|   :||..:|..:|||.                .:..||..| .|.:...|.:|.|.  |..|
Human    59 QG---SPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEGAEPGVLEEPNR--VQLP 118

  Fly   233 NGAGDFNW-----SHIEE------TLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRID 286
                 |.|     :|..:      ..|::.:::||||..|||.|.|||||||.||:||:|.||::
Human   119 -----FPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVE 178

  Fly   287 IANALSLSERQIKIWFQNRRMKSKKDRTLD------------SSPEH-C----GAGYTAMLPPLE 334
            :|..|:|:||.|||||||||||.||:....            :.||. |    |....|:.||..
Human   179 LAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPPPPP 243

  Fly   335 ATSTATTGAP 344
            ........||
Human   244 PGGAVPPAAP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 32/155 (21%)
Homeodomain 255..311 CDD:459649 38/55 (69%)
KLF1_2_4_N <321..404 CDD:425360 7/29 (24%)
PDX1NP_000200.1 Transactivation domain. /evidence=ECO:0000250 13..73 16/75 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 7/39 (18%)
Antp-type hexapeptide 118..123 3/9 (33%)
Homeodomain 147..203 CDD:459649 38/55 (69%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 11/53 (21%)

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