DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Meox1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_063125617.1 Gene:Meox1 / 363684 RGDID:1308911 Length:328 Species:Rattus norvegicus


Alignment Length:74 Identity:22/74 - (29%)
Similarity:32/74 - (43%) Gaps:23/74 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 PPLEATSTATTGAPSVPVPMYHHHQ-----TTAAYPAYSHS------HSHGYGLLNDYPQQQT-- 382
            |..|.:|  .:|.|..|...:..||     .|||||.:|.|      ||        .|:.:.  
  Rat    25 PHSEGSS--ASGLPHYPPTPFSFHQKSDFPATAAYPDFSTSCLAATPHS--------LPRAERIF 79

  Fly   383 HQQYDAYPQ 391
            ::|:.|:||
  Rat    80 NEQHPAFPQ 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787
Homeodomain 255..311 CDD:459649
KLF1_2_4_N <321..404 CDD:425360 22/74 (30%)
Meox1XP_063125617.1 None
Blue background indicates that the domain is not in the aligned region.

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