Protein Alignment ftz and prd

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Alignment Length: 261
• Identity: 65/261 - (24%)
• Similarity: 105/261 - (40%)
• Gaps: 62/261 - (23%)

  Fly   159 VPTPSASEDVDYLDVYSP-----QSQTQKLKNG--DFATPPPTTPTSL------PPLE----GIS 206
            :.||.....::.....||     :.:.:.::.|  |.:|.|..:..|.      .||:    ..|
  Fly   101 IATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSAS 165

  Fly   207 TPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDC---------KDSKRTRQTYT 262
            ..|...|.|:||:...::        :|....|....:|.: |||         :..:|.|.|::
  Fly   166 GSPAGDGTKASSSCGSDV--------SGGHHNNGKPSDEDI-SDCESEPGIALKRKQRRCRTTFS 221

  Fly   263 RYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGA--G 325
            ..|..|||:.|...:|.....|.::|...:|:|.:|::||.|||.:.:|..|..|.    ||  |
  Fly   222 ASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQHTSVSG----GAPGG 282

  Fly   326 YTAMLPPLEATSTATTGAPSVP--VPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYDA 388
            ..|.:..:.|:|:..:...|||  .|:       |..|          |.|:  |.....||||.
  Fly   283 AAASVSHVAASSSLPSVVSSVPSMAPL-------AMMP----------GSLD--PATVYQQQYDF 328

  Fly   389 Y 389
            |
  Fly   329 Y 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	20/105 (19%)
		Homeodomain	255..311	CDD:459649	19/55 (35%)
		KLF1_2_4_N	<321..404	CDD:425360	20/73 (27%)
prd	NP_723721.1	PAX	27..154	CDD:238076	9/52 (17%)
		Homeodomain	214..270	CDD:459649	19/55 (35%)