Protein Alignment ftz and scro

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 278
• Identity: 60/278 - (21%)
• Similarity: 96/278 - (34%)
• Gaps: 83/278 - (29%)

  Fly   152 YDQEYVTVPTPSASEDVDYLDVYSP-QSQTQKLK-NGDFATPPP----------------TTPTS 198
            :.|...|:...:.|......|:.|| :...:||: ||:  .|.|                ||.|.
  Fly   100 HSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGN--PPSPFRSNSSSSSINSPGTLTTSTM 162

  Fly   199 LPPLEGISTPPQSPGEKS---------------------------------------SSAVSQEI 224
            ..|. .:.|...|||.::                                       ||:.|..:
  Fly   163 ANPY-AMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTM 226

  Fly   225 NHRIVTAPNGAGDFNWSHIEETLASDCK-------DSKRTRQTYTRYQTLELEKEFHFNRYITRR 282
            :|.          .|.|.:.....||.|       ..::.|..:|:.|..|||:.|...||::..
  Fly   227 SHM----------GNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAP 281

  Fly   283 RRIDIANALSLSERQIKIWFQNRRMKSK---KDRTLDSSPEH---CGAGYTAMLPPLEATSTATT 341
            .|..:|:.:.|:..|:||||||.|.|.|   |::.:....:|   ..:.....:|.|.......:
  Fly   282 EREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCS 346

  Fly   342 GAPSVPVPMYHHHQTTAA 359
            |..|......|...:|:|
  Fly   347 GNNSSSQSQQHGTNSTSA 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	26/152 (17%)
		Homeodomain	255..311	CDD:459649	22/58 (38%)
		KLF1_2_4_N	<321..404	CDD:425360	8/42 (19%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	21/55 (38%)