DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and HOXC4

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_055435.2 Gene:HOXC4 / 3221 HGNCID:5126 Length:264 Species:Homo sapiens


Alignment Length:893 Identity:146/893 - (16%)
Similarity:285/893 - (31%) Gaps:298/893 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FALNHLGSTGEAAHTSSTFGSSVSGNGVANGGTHTSSGEWSNEIVSWLYSNFHKVPAPMDAWIKS 81
            :.:.:||        ..|.|.:::.:.||.|......|..:|.              |....:..
Human   109 YGMIYLG--------KDTNGENIAESLVAEGLATRREGMRANN--------------PEQNRLSE 151

  Fly    82 LNEAAKKVTSPTKCEVLFEGFGDHS--DV---LQPP---------KISNVRVEHGPRDHLTVRSN 132
            ..|.||    .:|..:..||.|.|:  |:   ::.|         |..|..:|| .||...||:.
Human   152 CEEQAK----ASKKGMWSEGNGSHTIRDLKYTIENPRHFVDSHHQKPVNAIIEH-VRDGSVVRAL 211

  Fly   133 V----HLPCVKL---------RLVSSQRTPERMIVSNYDVSIVDLRGEVECRMACIANQLYLMGC 184
            :    ||..|.|         |......|||..        ..:.:...|.|:.....|:.|..|
Human   212 LLPGHHLVTVMLSGIKCPTFRRETDGSETPEPF--------AAEAKFFTESRLLQRDVQIILESC 268

  Fly   185 FSGRPEMDIELRNTDPNAQYQVSIPMVEESIRRCL---LSAVT----NINLSEEMPEER--NTFA 240
            .:.      .|..|..:....::..:::|...||:   ::..|    .:..:|...:||  ..:.
Human   269 HNQ------NLLGTILHPNGNITELLLKEGFARCVDWSIAVYTRGAEKLRAAERFAKERRLRIWR 327

  Fly   241 DTFSRTIYNPPT------------------HSPSGTMRNSYNNYDTNLHVDAY--------GTQS 279
            |      |.|||                  ::.:..::.:..:|.| :|:.:.        ..|.
Human   328 D------YVPPTANLDQKDKQFVAKVMQVLNADAIVVKLNSGDYKT-IHLSSIRPPRLEGDNIQD 385

  Fly   280 SHRSNSPSGDVPEMF------------KKLNES--HLISPSYNTNSIPNKMRIKVIKASRLGREV 330
            .::...|..|:|.||            ||:|.:  ::...|..|.::|..........:..|..:
Human   386 KNKKLRPLYDIPYMFEAREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINI 450

  Fly   331 SQPFVNVEM-----------------DE----PAQKYSTTKGINAN------------------- 355
            ::..|:..:                 ||    .|:.....||:::.                   
Human   451 AEALVSKGLATVIRYRQDDDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAK 515

  Fly   356 ---PFWEETFDFDLTPATEEILFEIYEGND-KLHMNDDEGFLGLAIVNFEEIRRSGETVHSLKLQ 416
               ||.:.      ...:|.::..::.|:. ||::..:...:...:... |..|....:..|..:
Human   516 QFLPFLQR------AGRSEAVVEYVFSGSRLKLYLPKETCLITFLLAGI-ECPRGARNLPGLVQE 573

  Fly   417 GRPYRKDA--------ISGEITVQFDFFYDPNLLTSGKLTDTVKVTNPNGSEF--RETLT----T 467
            |.|:.::|        :..|:.|:.:     ::..:|.....:.:...|.|..  .:.|:    |
Human   574 GEPFSEEATLFTKELVLQREVEVEVE-----SMDKAGNFIGWLHMDGANLSVLLVEQALSKVHFT 633

  Fly   468 HRRPIYDPHDNFDGHEPIVPSKTTTVTVKTVSQTLKEKPTIQSVHGSLENAVDPATQKIL----- 527
            ..|..|        ::|::.::......|.......|:..::.|...||.....|:.|.:     
Human   634 AERSAY--------YKPLLSAEEAAKQRKEKVWAHYEERPVEEVMPVLEEKERSASYKPVFVTEI 690

  Fly   528 --DRQFKNHNDPKTRELEAKLQSVAQSMSASSTLDRPSKNGN--------------NGQYYRDQ- 575
              |..|...:.....:||..::::...:|:     .|...|:              :|::||.: 
Human   691 TDDLHFYVQDVETGTQLEKLMENMRNDISS-----HPPVEGSYAPRRGEFCIAKFVDGEWYRARV 750

  Fly   576 ----------------------------TAPPEFHEELDVRQSRDKSKKAPTEKRDRSF-FGELK 611
                                        |.||.|           .::..|.:..:.:| |.::.
Human   751 EKVESPAKVHVFYIDYGNREILPSTRLGTLPPAF-----------STRVLPAQATEYAFAFIQVP 804

  Fly   612 DRLSGRRGRSQKRSKSV-----DVENNQLLEEAVSLPPSRDPSRTRYAVSSNDKYRETHSVGGRS 671
            .       ....|:.:|     |::|.|.|.....|..|......::|.|..|       ||   
Human   805 Q-------DEDARTDAVDSVVRDIQNTQCLLNVEHLSASCPHVTLQFADSKGD-------VG--- 852

  Fly   672 GESTKSLYQHSTLILELDQDKQAKYFLIPPAMLNEPAAS---RLMRKG 716
                ..|.:...:::|:.::||.:..:.......|.|.|   .|.|.|
Human   853 ----LGLVKEGLVMVEVRKEKQFQKVITEYLNAQESAKSARLNLWRYG 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 51/266 (19%)
Homeodomain 255..311 CDD:459649 14/77 (18%)
KLF1_2_4_N <321..404 CDD:425360 14/126 (11%)
HOXC4NP_055435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 5/28 (18%)
Antp-type hexapeptide 135..140 1/4 (25%)
Homeodomain 157..213 CDD:459649 16/60 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 11/57 (19%)

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