DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and CG11294

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:175 Identity:49/175 - (28%)
Similarity:70/175 - (40%) Gaps:42/175 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 KRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL---- 315
            :|.|.|:|..|..|||..|....|.....|.::|..:||||.::::||||||.|.:|...|    
  Fly    25 RRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQLLQ 89

  Fly   316 DSSPEHC------------------GAGYTAMLPPL---EATSTATTGAPSVPV---PMYHHHQT 356
            |:....|                  |.|.||. ||.   |..|:|:..:....|   |  :....
  Fly    90 DAWRMRCLSLGTPPVMGGGAVQGGSGNGATAR-PPSQTPENLSSASKDSELAEVGNGP--NSGSF 151

  Fly   357 TAAYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYPQQYQHQCSYQQ 401
            |..:||:...|           |||.||.:.....|.:...:|.:
  Fly   152 TMMHPAFQQQH-----------QQQQHQGHQQATDQDKLSKTYTE 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360 23/105 (22%)
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 21/51 (41%)
Blue background indicates that the domain is not in the aligned region.

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