DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and nkx2.7

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571494.1 Gene:nkx2.7 / 30694 ZFINID:ZDB-GENE-990415-179 Length:269 Species:Danio rerio


Alignment Length:292 Identity:74/292 - (25%)
Similarity:114/292 - (39%) Gaps:64/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPS---------ASED 167
            :|.:||....::          ||....:..:...:|......|..:||..|         .|..
Zfish     1 MLPSPVTSTPFS----------VKDILKLEQQQALNPGVFMGVEQDSVPLQSLQLQCMQNTLSRS 55

  Fly   168 VDYLDVYSPQS--QTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVT 230
            :|.|  |||:.  ..:::|..||              :.:.:...||.|:...|     |.....
Zfish    56 LDLL--YSPEKGIPGEQVKCDDF--------------DIVRSSCGSPTEEEMDA-----NEETSM 99

  Fly   231 APNGAGDFNWSHIEETLASDCKD--SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSL 293
            .|.....:: |...|||....|.  .::.|..:::.|..|||:.|...||::...|..:|.||.|
Zfish   100 CPFTDSSYS-SKNGETLREKPKQRLRRKPRVLFSQTQVFELERRFKQQRYLSAPERDHLALALKL 163

  Fly   294 SERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTA 358
            :..|:||||||||.|.|:.|. |.|.|..|....| :|.|........|||         :..|.
Zfish   164 TSTQVKIWFQNRRYKCKRQRQ-DKSLELAGPRRVA-VPVLVRDGKPCHGAP---------YNVTV 217

  Fly   359 AYPAYSHSHSHGYGLLNDYPQQQTHQQYDAYP 390
            :||..::.:|:|.   |.|     |..:.:.|
Zfish   218 SYPYNNYYNSYGN---NPY-----HCNFTSVP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 28/146 (19%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360 16/70 (23%)
nkx2.7NP_571494.1 COG5576 87..210 CDD:227863 41/130 (32%)
Homeodomain 125..181 CDD:459649 23/55 (42%)

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