Protein Alignment ftz and msx2b

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_571351.3
• Gene: msx2b / 30531
• ZFINID: ZDB-GENE-980526-492
• Length: 241
• Species: Danio rerio
• Alignment Length: 180
• Identity: 44/180 - (24%)
• Similarity: 75/180 - (41%)
• Gaps: 45/180 - (25%)

  Fly   206 STPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDC-----KDSKRTRQTYTRYQ 265
            ::|.:|...:.....|..:|.|              :.:....|.|     |.:::.|..:|..|
Zfish    76 TSPVKSESPEPDDCTSWVMNSR--------------YSQTRQESPCPLRKHKTNRKPRTPFTTSQ 126

  Fly   266 TLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAML 330
            .|.||::|...:|::...|.:.:::|:|:|.|:||||||||.|:|:                  |
Zfish   127 LLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKR------------------L 173

  Fly   331 PPLEATSTATTGAP------SVPVPMYHHHQTTAAYPAYSHSHSHGYGLL 374
            ...|......|..|      |:|:|:  ..|..:|...|..|:.:...||
Zfish   174 QEAELEKLKLTAKPALHPNFSLPLPL--GTQLHSAVSLYGQSYPYQRPLL 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	5/41 (12%)
		Homeodomain	255..311	CDD:459649	22/55 (40%)
		KLF1_2_4_N	<321..404	CDD:425360	13/60 (22%)
msx2b	NP_571351.3	Homeodomain	116..172	CDD:459649	22/55 (40%)