Protein Alignment ftz and msx1a

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_571348.1
• Gene: msx1a / 30527
• ZFINID: ZDB-GENE-980526-312
• Length: 233
• Species: Danio rerio
• Alignment Length: 252
• Identity: 67/252 - (26%)
• Similarity: 102/252 - (40%)
• Gaps: 45/252 - (17%)

  Fly   157 VTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQ-SPGEKSSSAV 220
            ||:.:.:|.||...:.....:.||:.....| |..|...|.|:..|.....|.: ||...:....
Zfish     5 VTMSSQAAEEDAGVMLAGQTEMQTRVTVQED-AQRPKILPFSVEALMADRRPNRGSPDADARLGF 68

  Fly   221 SQEINHRIVTAPN-------GAGDFNWSHIEETLASDC-----KDSKRTRQTYTRYQTLELEKEF 273
            |.|:....|.|.:       ....|:.|.:....   |     |.:::.|..::..|.|.||::|
Zfish    69 SVEVLQLPVKAESPERSTWVPRARFSPSRLSPPA---CPLRKHKTNRKPRTPFSTAQLLALERKF 130

  Fly   274 HFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATST 338
            ...:|::...|.:.:::|||:|.|:||||||||.|:|  |..::..|........:|||
Zfish   131 RQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAK--RLQEAELEKLKMAAKPLLPP------ 187

  Fly   339 ATTGAPSVPVPMYHHHQTTAAYPAYS------HSHSHGYGLLNDYPQQQTHQQYDAY 389
                |..:..|...|      .||||      |.||.....:..|    ||..|..|
Zfish   188 ----AFGISFPAGAH------IPAYSAGSHPFHRHSANVSPVGLY----THMGYSMY 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	22/98 (22%)
		Homeodomain	255..311	CDD:459649	22/55 (40%)
		KLF1_2_4_N	<321..404	CDD:425360	18/75 (24%)
msx1a	NP_571348.1	Homeodomain	112..168	CDD:459649	23/57 (40%)