DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and hoxb8b

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:82 Identity:47/82 - (57%)
Similarity:60/82 - (73%) Gaps:6/82 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 FNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWF 302
            |.|...:.|      ..:|.||||:|||||||||||.||.|:||:|||::::||:|:|||:||||
Zfish   135 FPWMRPQAT------GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWF 193

  Fly   303 QNRRMKSKKDRTLDSSP 319
            ||||||.||:...|..|
Zfish   194 QNRRMKWKKEHNKDKFP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 3/9 (33%)
Homeodomain 255..311 CDD:459649 40/55 (73%)
KLF1_2_4_N <321..404 CDD:425360
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 2/3 (67%)
Homeodomain 146..202 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.

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