Protein Alignment ftz and hoxc6a

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_571198.1
• Gene: hoxc6a / 30346
• ZFINID: ZDB-GENE-990415-113
• Length: 231
• Species: Danio rerio
• Alignment Length: 226
• Identity: 82/226 - (36%)
• Similarity: 105/226 - (46%)
• Gaps: 55/226 - (24%)

  Fly   129 TTVEQVKKAPAVSTKVTAS---PAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFAT 190
            ||.:.|:...:..|.||.:   .:|.|          |..::|.:.....|......:...|...
Zfish    29 TTYDSVRHFSSYGTTVTQNRIYASPFY----------SPQDNVVFGSSRGPYEYGSNVFLQDKDV 83

  Fly   191 PPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGD--------FNW-----SH 242
            .|....||:             |..:.|.|:||.|  :..|..|..|        :.|     ||
Zfish    84 LPSCRQTSM-------------GLNAQSHVAQEYN--LEQARAGTQDQKANNIQIYPWMQRMNSH 133

  Fly   243 IEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRM 307
            ......|   |.:|.||.|:||||||||||||||||:||||||:|||||.|:|||||||||||||
Zfish   134 SGVGYGS---DRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRM 195

  Fly   308 KSKKDRTLDSSPEHCGAGYTAMLPPLEATST 338
            |.||:..|           |:.:|..|:..|
Zfish   196 KWKKETNL-----------TSTVPGTESAGT 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	27/134 (20%)
		Homeodomain	255..311	CDD:459649	46/55 (84%)
		KLF1_2_4_N	<321..404	CDD:425360	4/18 (22%)
hoxc6a	NP_571198.1	Antp-type hexapeptide	123..128		1/4 (25%)
		Homeodomain	143..199	CDD:459649	46/55 (84%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	200..231		5/27 (19%)