DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and hoxb8a

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:217 Identity:72/217 - (33%)
Similarity:95/217 - (43%) Gaps:80/217 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 YSPQSQTQKLKNGD----------FATPPPTTPTSL------------PPLE-----GISTPPQS 211
            |...|...|.|:||          ||....|.||.:            |.::     |.||...:
Zfish     4 YFVNSLFTKYKSGDTLRPNYYECGFAQDLGTRPTVVYGPGTGATFQHAPQIQEFYHHGASTLSAA 68

  Fly   212 PGEKSSSAVSQEINHRIVTAPNGAGDF-NWSHIE-ETL----------ASDCK------------ 252
            |.::|..|         ||.....|:| .:..:: :||          .||||            
Zfish    69 PYQQSPCA---------VTCHGEPGNFYGYDALQRQTLFGAQDADLVQYSDCKLATGGIGDETDN 124

  Fly   253 --------------------DSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQ 297
                                ..:|.||||:|||||||||||.||.|:||:|||::::||.|:|||
Zfish   125 TEQSPSPTQLFPWMRPQVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 189

  Fly   298 IKIWFQNRRMKSKKDRTLDSSP 319
            :||||||||||.||:...|..|
Zfish   190 VKIWFQNRRMKWKKENNKDKFP 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 24/112 (21%)
Homeodomain 255..311 CDD:459649 40/55 (73%)
KLF1_2_4_N <321..404 CDD:425360
hoxb8aXP_005171620.1 Homeodomain 147..203 CDD:459649 40/55 (73%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.