DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and hoxb5a

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_571176.2 Gene:hoxb5a / 30317 ZFINID:ZDB-GENE-980526-70 Length:275 Species:Danio rerio


Alignment Length:218 Identity:81/218 - (37%)
Similarity:103/218 - (47%) Gaps:67/218 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SPQSQTQKLKNGDFATPPP---TTPTSLPPLEGISTPPQSPG------------------EKSSS 218
            :|:::.::..:...|:|.|   :...||.| :| |:||....                  |.|:|
Zfish    80 APETRFRQPSSCSLASPEPLPCSNSESLGP-KG-SSPPSDQSTTTAGNNLNSNTHFTEIDEASAS 142

  Fly   219 AVSQEINHRI-----------------VTAPNGAGD----FNWS---HIEETLASDCKDSKRTRQ 259
            :.::|.:||.                 .|:....|.    |.|.   ||...:..  .|.||.|.
Zfish   143 SETEEASHRANNSAPRTQQKQETTATSTTSATSDGQAPQ
IFPWMRKLHISHDMTG--PDGKRART 205

  Fly   260 TYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGA 324
            .||||||||||||||||||:||||||:||:||.||||||||||||||||.|||..|.|       
Zfish   206 AYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK
DNKLKS------- 263

  Fly   325 GYTAMLPPLEATSTATTGAPSVP 347
                       .|.||.|:...|
Zfish   264 -----------MSLATAGSAFQP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 23/117 (20%)
Homeodomain 255..311 CDD:459649 47/55 (85%)
KLF1_2_4_N <321..404 CDD:425360 5/27 (19%)
hoxb5aNP_571176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..181 19/102 (19%)
Antp-type hexapeptide 182..187 2/4 (50%)
Homeodomain 201..257 CDD:459649 47/55 (85%)

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