Protein Alignment ftz and Hmx2

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001099773.1
• Gene: Hmx2 / 293538
• RGDID: 1565366
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 333
• Identity: 68/333 - (20%)
• Similarity: 114/333 - (34%)
• Gaps: 91/333 - (27%)

  Fly    53 QESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPV 117
            :|...:.|.........|.|::....|:..|.:.....|...:.| :::.||.|
  Rat     4 KEDVGKGCPAAGGVSSFTIQSILGGGPSEAPREPAGWPARKRSLS-VSSEEEEP----------- 56

  Fly   118 KKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVP-------------TPSASEDVD 169
                          |:..||||........|.....:.:..:|             .|:|||...
  Rat    57 --------------EEGWKAPACYCPDPHGPKEPSPKHHPPIPFPCLGTPKGSGGAGPAASERTP 107

  Fly   170 YLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNG 234
            :|....|..:.:|.:.....:|.|          |...|.....|:.:.|.
  Rat   108 FLSPSHPDFKEEKERLLPAGSPSP----------GPERPRDGGAERQAGAA-------------- 148

  Fly   235 AGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIK 299
                               .|:||..::|.|..:||..|...||::...|..:|::|.|:|.|:|
  Rat   149 -------------------KKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVK 194

  Fly   300 IWFQNRRMKSKKDRTLD---SSPEHCGAGYTAMLPPLEATSTATTGAP-----SVPVPMYHHHQT 356
            .||||||.|.|:..:.:   ::..|..| .|.:..||....::....|     :.|.|:|:....
  Rat   195 TWFQNRRNKWKRQLSAELEAANMAHASA-QTLVGMPLVFRDSSLLRVPVPRSLAFPAPLYYPSSN 258

  Fly   357 TAAYPAYS 364
            .:|.|.|:
  Rat   259 LSALPLYN 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	31/207 (15%)
		Homeodomain	255..311	CDD:459649	24/55 (44%)
		KLF1_2_4_N	<321..404	CDD:425360	12/49 (24%)
Hmx2	NP_001099773.1	Homeodomain	150..206	CDD:459649	24/55 (44%)