DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and ceh-9

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001021797.1 Gene:ceh-9 / 267057 WormBaseID:WBGene00000434 Length:147 Species:Caenorhabditis elegans


Alignment Length:135 Identity:40/135 - (29%)
Similarity:64/135 - (47%) Gaps:18/135 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 LPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDF--------NWSHIEETLASDCKDSK 255
            |.|...:.|....|..::|..:..     |:..|...|:.        :....:|:....|:.:|
 Worm    10 LQPYFALLTSDVKPQRRTSHLIKD-----ILDLPTVNGEIDEFGRCKSSLDQAKESPIEKCQKTK 69

  Fly   256 R--TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSS 318
            |  .|.|::..|..||||:|...:|::...|.::|..|.::|.|:||||||||.|.||   ::|.
 Worm    70 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK---IESE 131

  Fly   319 PEHCG 323
            .|..|
 Worm   132 KERSG 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 9/56 (16%)
Homeodomain 255..311 CDD:459649 25/57 (44%)
KLF1_2_4_N <321..404 CDD:425360 1/3 (33%)
ceh-9NP_001021797.1 Homeodomain 71..127 CDD:459649 23/55 (42%)

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