DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and Gbx1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:377 Identity:98/377 - (25%)
Similarity:132/377 - (35%) Gaps:136/377 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VTTQTVPPVQ-PTTPPPKA-----TKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYF 127
            |..|.:.|.. |...||.|     ..|.:....|.:..||   ||.:  .||..:......||.:
Mouse   115 VLPQALAPAPLPAGLPPLAPLASFAGRLSNTFCAGLGQAV---PSMV--ALTTALPSFAEPPDAY 174

  Fly   128 YTTVEQVKKAPAVSTKVTASPAPSY--------------DQEYVTVPTPSA----SEDVDYL--- 171
            |...|..  |.|.||...::|.|:.              .:|.||.|.|..    ||....|   
Mouse   175 YGPPELA--AAAASTASRSNPEPAARRTDGALDAEELLPAREKVTEPPPPPPPHFSETFPSLPAE 237

  Fly   172 -DVYSPQSQTQKLK----------------NGD----FATPPPTTPTSL----PPLEGISTPPQS 211
             .|||  |..:||:                .||    |.......|.:|    |.|:|      |
Mouse   238 GKVYS--SDEEKLEPPAGDPAGSEQEEEGSGGDSEDSFLDSSAGGPGALLGPKPKLKG------S 294

  Fly   212 PGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFN 276
            ||..:.........   ||.|.|                  .|:|.|..:|..|.||||||||..
Mouse   295 PGTGAEEGTPVATG---VTTPGG------------------KSRRRRTAFTSEQLLELEKEFHCK 338

  Fly   277 RYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATT 341
            :|::...|..||:||.|||.|:||||||||.|.|:.:          ||          ..::.:
Mouse   339 KYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIK----------AG----------NVSSRS 383

  Fly   342 GAP------SVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQYD 387
            |.|      .||:|::                      :|.:..:..|||.:
Mouse   384 GEPVRNPKIVVPIPVH----------------------VNRFAVRSQHQQME 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 54/230 (23%)
Homeodomain 255..311 CDD:459649 31/55 (56%)
KLF1_2_4_N <321..404 CDD:425360 11/73 (15%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 31/134 (23%)
Homeodomain 317..373 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.