DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and ceh-28

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_510169.4 Gene:ceh-28 / 191619 WormBaseID:WBGene00000450 Length:201 Species:Caenorhabditis elegans


Alignment Length:207 Identity:61/207 - (29%)
Similarity:85/207 - (41%) Gaps:67/207 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 STKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQT---QKLKNGDFATPPPTTPTSLPPL 202
            ||:::::          ||..||        :|..|..|:   .:.||        |.|:.|...
 Worm     3 STQISST----------TVILPS--------EVIQPPQQSAVPSEFKN--------TLPSRLNLF 41

  Fly   203 EGIS------TPPQSP-----------GEKS-SSAVSQE----INHRIVTAPNGAGDFNWSHIEE 245
            ||..      |.|..|           |..| .|:.||.    .|||..:.|            :
 Worm    42 EGFDQSFSELTNPYQPVIPLMQRESLLGASSYYSSPSQNQRSYQNHRQHSNP------------D 94

  Fly   246 TLASDCKDSKR-TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKS 309
            |:....:..|| .|..:|::|..|||:.|...||:|...|.::|..|.|:..|:||||||||.|.
 Worm    95 TINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKC 159

  Fly   310 KK---DRTLDSS 318
            |:   ||||..|
 Worm   160 KRLAQDRTLQLS 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 29/131 (22%)
Homeodomain 255..311 CDD:459649 26/56 (46%)
KLF1_2_4_N <321..404 CDD:425360
ceh-28NP_510169.4 Homeodomain 105..161 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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