DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and tab-1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_495392.1 Gene:tab-1 / 185156 WormBaseID:WBGene00006380 Length:197 Species:Caenorhabditis elegans


Alignment Length:186 Identity:53/186 - (28%)
Similarity:85/186 - (45%) Gaps:31/186 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 TPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTS-----------LPPLEGISTPPQSPGE 214
            ||.:|..:|.| :....::.|::...|..:|.|.:.:.           ..||....||..:|..
 Worm     3 TPVSSFSIDDL-LRGHSNEIQRILKLDQTSPTPQSSSDEGSEKSSISVMSVPLTNELTPTITPAL 66

  Fly   215 KSS---SAVSQEINHRIVTAP-NGAGDFNWSHIEETLASDCKDS----------KRTRQTYTRYQ 265
            ...   :|.:..|.|.::.|. ||.....||..::...|:...:          ::.|..::..|
 Worm    67 SDQLWLAAAAFPIEHSLLLAQRNGVFPGFWSTADQIRLSNATKAYRRLRLECSRRKARTVFSDQQ 131

  Fly   266 TLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK-----DRTLD 316
            ...||:.|...||::...||::||||:|||.|:|.||||||||.||     |.::|
 Worm   132 LQGLERRFESQRYLSTPERIELANALNLSETQVKTWFQNRRMKHKKVVRKDDNSVD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 22/101 (22%)
Homeodomain 255..311 CDD:459649 26/55 (47%)
KLF1_2_4_N <321..404 CDD:425360
tab-1NP_495392.1 Homeodomain 121..177 CDD:459649 26/55 (47%)
Blue background indicates that the domain is not in the aligned region.

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