DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and php-3

DIOPT Version :9

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_499573.1 Gene:php-3 / 176640 WormBaseID:WBGene00004024 Length:275 Species:Caenorhabditis elegans


Alignment Length:354 Identity:83/354 - (23%)
Similarity:135/354 - (38%) Gaps:126/354 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MYNMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTP 82
            |..|.:..::||.:..:|.|:               |::.||                   ||:|
 Worm     5 MQQMMNNSNMPPPFVKSSDSH---------------ETHDES-------------------PTSP 35

  Fly    83 PPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTAS 147
            ..|.:...|...:|: .||::.                    :::.|...|::::.:.|:.|::.
 Worm    36 FIKRSDSPATTSSAA-AAAMQH--------------------NFWSTRAAQLQQSVSGSSGVSSG 79

  Fly   148 PAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTP---- 208
                        .:.|||.::.     ..|:.....:..|.|:.|...|  ||...|:|.|    
 Worm    80 ------------SSSSASNNLS-----RTQADNHSERGSDTASSPQVAP--LPTSSGMSMPAAAA 125

  Fly   209 ----PQSPGE------------------KSSSAVS-------QEINHRIVTAP------NGAGDF 238
                |.:.|.                  .:|.|.|       |:......:.|      |..|..
 Worm   126 AGMYPFNAGRFPTEFNMMVNQSMYNDFYSNSLAASSWPYSYPQQYPFANYSMPSLDGNLNDGGQL 190

  Fly   239 NWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQ 303
            .|:       |.....::.|:.||:.|||||||||.:|.|:::::|.::|..|.|:|||:|||||
 Worm   191 EWT-------SSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQ 248

  Fly   304 NRRMKSKKDRTLDSSPEHCGAGYTAMLPP 332
            |||||.||.:...|...      |.||.|
 Worm   249 NRRMKDKKQKQRTSGDP------TGMLMP 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:281812 44/268 (16%)
Homeobox 257..310 CDD:278475 31/52 (60%)
php-3NP_499573.1 Homeobox 202..256 CDD:365835 31/53 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.