DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Lbx1

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_034821.2 Gene:Lbx1 / 16814 MGIID:104867 Length:282 Species:Mus musculus


Alignment Length:267 Identity:62/267 - (23%)
Similarity:92/267 - (34%) Gaps:70/267 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TTVEQVKKAPAVSTK---VTASPAPSYDQEYVTVPTPSASEDV----DYLDVYSPQSQTQKLKNG 186
            |:.|..|.||....:   :...|.|:...:.:   ||.:.||:    .....||.......|...
Mouse     2 TSKEDGKAAPGEERRRSPLDHLPPPANSNKPL---TPFSIEDILNKPSVRRSYSLCGAAHLLAAA 63

  Fly   187 DFATPPPTTPTSLPPLEG----ISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETL 247
            |...|...      ||.|    ..|.|....|:.:|...:.:...::.|..|..........:| 
Mouse    64 DKHAPGGL------PLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQT- 121

  Fly   248 ASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD 312
               .|..:::|..:|.:|..||||.|.:.:|::...|..||..|.|:..|:..||||||.|.|:|
Mouse   122 ---PKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRD 183

  Fly   313 -------------------------RTLDSSPEHCGAG------------YTAMLPPLEATSTAT 340
                                     ..|:.:.|..|.|            .:..|||        
Mouse   184 LEEMKADVESAKKLGPSGQMDIVALAELEQNSEASGGGGGGGCGRAKSRPGSPALPP-------- 240

  Fly   341 TGAPSVP 347
             |||..|
Mouse   241 -GAPQAP 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 26/129 (20%)
Homeodomain 255..311 CDD:459649 22/55 (40%)
KLF1_2_4_N <321..404 CDD:425360 9/39 (23%)
Lbx1NP_034821.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/36 (22%)
Homeodomain 126..182 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..282 11/46 (24%)

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