DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Hoxd8

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_032302.2 Gene:Hoxd8 / 15437 MGIID:96209 Length:289 Species:Mus musculus


Alignment Length:325 Identity:92/325 - (28%)
Similarity:126/325 - (38%) Gaps:106/325 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTAS- 147
            |..:|.||...||:..||.....:      .||.    |...:|         ||.||.:..|: 
Mouse     8 PLYSKYKAAAAAAAAAAAAAAGEA------INPT----YYDCHF---------APEVSGRHAAAL 53

  Fly   148 ------------------PAPSYDQEYVTVPTPSA--------SEDVDYLDVYSPQSQTQKLKNG 186
                              |.||        |.|..        .:|..:....||.:..|     
Mouse    54 QLYGNSAAGFPHAHPHPHPHPS--------PPPGCGGGGGPGPGQDYFHAGAGSPTAAYQ----- 105

  Fly   187 DFATPPPTTPTSLPP------------------LEGISTPP-----------QSPGEKSSSA-VS 221
              |.|||..|...||                  .:.:...|           |.|..||||. :.
Mouse   106 --AAPPPPHPPPPPPPPPCGGIACHGEPAKFYGYDNLQRQPIFTTQQEAELVQYPDCKSSSGNIG 168

  Fly   222 QEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRID 286
            ::.:| :..:.:.:..|.|...:.     ....:|.||||:|:|||||||||.||.|:||:|||:
Mouse   169 EDPDH-LNQSSSPSQMFPWMRPQA-----APGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIE 227

  Fly   287 IANALSLSERQIKIWFQNRRMKSKKDRTLD----SSPEHCGAGYTAMLPPLEATSTATTGAPSVP 347
            :::.|:|:|||:||||||||||.||:...|    |.||.....     |..|.:.....||...|
Mouse   228 VSHTLALTERQVKIWFQNRRMKWKKENNKDKFPASRPEAKDGD-----PKKEVSGLEEDGAEGCP 287

  Fly   348  347
            Mouse   288  287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 43/220 (20%)
Homeodomain 255..311 CDD:459649 38/55 (69%)
KLF1_2_4_N <321..404 CDD:425360 5/27 (19%)
Hoxd8NP_032302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..125 16/77 (21%)
COG5576 139..272 CDD:227863 54/143 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..184 4/22 (18%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeodomain 196..252 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..289 10/41 (24%)

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