Protein Alignment ftz and Hoxc9

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_032298.1
• Gene: Hoxc9 / 15427
• MGIID: 96199
• Length: 260
• Species: Mus musculus
• Alignment Length: 300
• Identity: 83/300 - (27%)
• Similarity: 113/300 - (37%)
• Gaps: 91/300 - (30%)

  Fly    45 SNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTL 109
            |||        |.:|...::|::.:.::.     |.|....|..|     .:.::....:.||
Mouse     8 SNY--------YVDSLISHDNEDLLASRF-----PATGAHPAAAR-----PSGLVPDCSDFPS-- 52

  Fly   110 RALLTNPVKKLKYTPDYFYTTVEQVKKAPAV-STKVTASPAPSYDQEYVTVPTPSASEDVDYLDV 173
                      ..:.|            .||| ||.....|:.|....:...|.|....|..|:..
Mouse    53 ----------CSFAP------------KPAVFSTSWAPVPSQSSVVYHPYGPQPHLGADTRYMRT 95

  Fly   174 Y-SPQSQTQKLKN-----GDFATPPPTTP---TSLPPLEGISTPPQ---SPGEKSSSAVSQEINH 226
            : .|.|......:     ..:|..|...|   ....|.:|.|.|..   ||||....|..
Mouse    96 WLEPLSGAVSFPSFPAGGRHYALKPDAYPGRRADCGPGDGRSYPDYMYGSPGELRDRAPQ----- 155

  Fly   227 RIVTAPNGAGD--------------------FNWSHIEETLASDCKDSKRTRQTYTRYQTLELEK 271
               |.|:...|                    .||.|...|        ::.|..||:||||||||
Mouse   156 ---TLPSPEADALAGSKHKEEKADLDPSNPVANWIHARST--------RKKRCPYTKYQTLELEK 209

  Fly   272 EFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            ||.||.|:||.||.::|..|:|:|||:||||||||||.||
Mouse   210 EFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	45/235 (19%)
		Homeodomain	255..311	CDD:459649	36/55 (65%)
		KLF1_2_4_N	<321..404	CDD:425360
Hoxc9	NP_032298.1	Hox9_act	1..179	CDD:461369	41/220 (19%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	120..182		14/69 (20%)
		Homeodomain	193..241	CDD:459649	29/47 (62%)