DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Hoxb5

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:350 Identity:107/350 - (30%)
Similarity:143/350 - (40%) Gaps:115/350 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TYYDNSGSNAY----------YQNTSNYQGYY--PQESYSESC-YYYNNQEQVTTQTVPPVQPTT 81
            :|:.||.|..|          |.:.|:..|.|  |...::.|. |.||..:....::        
Mouse     3 SYFVNSFSGRYPNGPDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRS-------- 59

  Fly    82 PPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTA 146
                       ..::|...||.|   :.||               |..:.::.:...|.|:...:
Mouse    60 -----------SASSSHFGAVGE---SSRA---------------FPASAQEPRFRQATSSCSLS 95

  Fly   147 SPAPSYDQEYVTVP---------TPSASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTP--TSLP 200
            ||.        ::|         .||||         ||..|         |||..::.  |.:.
Mouse    96 SPE--------SLPCTNGDSHGAKPSAS---------SPSDQ---------ATPASSSANFTEID 134

  Fly   201 PLEGISTPPQSPGEKSSSAVSQEINHRIVT---APNGAGD--FNWS---HIEETLASDCKDSKRT 257
            .....|.|.::..:.||.::::.....:.|   ||.|...  |.|.   ||...:..  .|.||.
Mouse   135 EASASSEPEEAASQLSSPSLARAQPEPMATSTAAPEGQTPQIFPWMRKLHISHDMTG--PDGKRA 197

  Fly   258 RQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEHC 322
            |..||||||||||||||||||:||||||:||:||.||||||||||||||||.|||..|.|     
Mouse   198 RTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS----- 257

  Fly   323 GAGYTAMLPPLEATSTATTGAPSVP 347
                         .|.||.|:...|
Mouse   258 -------------MSLATAGSAFQP 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 49/249 (20%)
Homeodomain 255..311 CDD:459649 47/55 (85%)
KLF1_2_4_N <321..404 CDD:425360 4/26 (15%)
Hoxb5NP_032294.2 PRK07003 <67..>171 CDD:235906 29/147 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 26/138 (19%)
Antp-type hexapeptide 176..181 2/4 (50%)
Homeodomain 195..251 CDD:459649 47/55 (85%)

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