Protein Alignment ftz and Hoxa6

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_034584.1
• Gene: Hoxa6 / 15403
• MGIID: 96178
• Length: 232
• Species: Mus musculus
• Alignment Length: 334
• Identity: 94/334 - (28%)
• Similarity: 125/334 - (37%)
• Gaps: 137/334 - (41%)

  Fly    16 MNMY--NMYHPHSLPPTYYDNSGSNAYYQNTSNYQGYY---------------PQESYSESCYYY 63
            |:.|  |...|.|||      ||.:::......|...|               |.::|:..|:|.
Mouse     1 MSSYFVNPTFPGSLP------SGQDSFLGQLPLYPAGYDALRPFPASYGASSLPDKTYTSPCFYQ 59

  Fly    64 NNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFY 128
            .:.                              |::|.  .|.|            .:|....||
Mouse    60 QSN------------------------------SVLAC--NRAS------------YEYGASCFY 80

  Fly   129 TTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATPPP 193
            :..:....:|:.:.|   ...|.                 |||. :||:.|.
Mouse    81 SDKDLSGASPSGNNK---QRGPG-----------------DYLH-FSPEQQY------------- 111

  Fly   194 TTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAP---------NGAGDFNWSHIEETLAS 249
                            :..|.....|:.:|...|..|:|         :.||....||
Mouse   112 ----------------KPDGSVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAVYGSH------- 153

  Fly   250 DCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRT 314
                .:|.|||||||||||||||||||||:||||||:|||||.|:||||||||||||||.||:..
Mouse   154 ----GRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENK 214

  Fly   315 LDSSPEHCG 323
            |.:|.:..|
Mouse   215 LINSTQASG 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	41/257 (16%)
		Homeodomain	255..311	CDD:459649	48/55 (87%)
		KLF1_2_4_N	<321..404	CDD:425360	1/3 (33%)
Hoxa6	NP_034584.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..126		11/87 (13%)
		Antp-type hexapeptide	135..140		0/4 (0%)
		Homeodomain	155..211	CDD:459649	48/55 (87%)