DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and Hoxa5

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus


Alignment Length:321 Identity:92/321 - (28%)
Similarity:120/321 - (37%) Gaps:98/321 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TYYDNSGSNAYYQNTSNYQ--GYYPQESYSESC------------YYYNNQE------------- 67
            :|:.||.... |.|..:||  .|....|.||..            |.||..:             
Mouse     3 SYFVNSFCGR-YPNGPDYQLHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGS 66

  Fly    68 ------QVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDY 126
                  .....:..|.:|....|..:......|           |....|:..:|.....:..  
Mouse    67 GERARSYAAGASAAPAEPRYSQPATSTHSPPPD-----------PLPCSAVAPSPGSDSHHGG-- 118

  Fly   127 FYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGDFATP 191
                    |.:...|:..:|:...::......|.|.||:|:      .:|.|..|.....:.:..
Mouse   119 --------KNSLGNSSGASANAGSTHISSREGVGTASAAEE------DAPASSEQAGAQSEPSPA 169

  Fly   192 PPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKR 256
            ||..|...|.:..:                 .|:|..:..|.|                    ||
Mouse   170 PPAQPQIYPWMRKL-----------------HISHDNIGGPEG--------------------KR 197

  Fly   257 TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDS 317
            .|..||||||||||||||||||:||||||:||:||.||||||||||||||||.|||..|.|
Mouse   198 ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 40/250 (16%)
Homeodomain 255..311 CDD:459649 47/55 (85%)
KLF1_2_4_N <321..404 CDD:425360
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 20/126 (16%)
Antp-type hexapeptide 176..181 1/4 (25%)
Homeodomain 196..252 CDD:459649 47/55 (85%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.