Protein Alignment ftz and Hoxa4

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_032291.1
• Gene: Hoxa4 / 15401
• MGIID: 96176
• Length: 285
• Species: Mus musculus
• Alignment Length: 263
• Identity: 87/263 - (33%)
• Similarity: 108/263 - (41%)
• Gaps: 53/263 - (20%)

  Fly   128 YTTVEQVKKAPAVSTKVTASP---------APSYDQEYVTVPT---PSASEDVDYLDVYSPQSQT 180
            |...:.....||.:......|         .|||.......|.   |.|....      ||....
Mouse    42 YPRPQSAPHLPAPNPHAARQPPAYYAPRAREPSYPGGLYPAPAAACPYACRGA------SPARPE 100

  Fly   181 QKLKNGDFATPPPTTPTSLPP---LEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGD--FNW 240
            |....|...:|.|..|.  ||   ..|.:||..:.| .|:.|....:..:....|.|...  :.|
Mouse   101 QSPAPGAHPSPAPQPPA--PPRHCAPGPTTPAVATG-GSAPACPLLLADQGPAGPKGKEPVVYPW 162

  Fly   241 S---HIEETLAS-DCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIW 301
            .   |:....:| :..:.||:|..|||.|.||||||||||||:||||||:||:.|.|||||:|||
Mouse   163 MKKIHVSAVNSSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIW 227

  Fly   302 FQNRRMKSKKDRTLDSSPEHCGAGYTAMLPPLEATSTATTGAPSVPVPMYHHHQTTAAYPAYSHS 366
            |||||||.|||.               .||..:..|:.|..||:.|......|.        .|.
Mouse   228 FQNRRMKWKKDH---------------KLPNTKMRSSNTASAPAGPPGKAQTHS--------PHP 269

  Fly   367 HSH 369
            |.|
Mouse   270 HPH 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	29/139 (21%)
		Homeodomain	255..311	CDD:459649	43/55 (78%)
		KLF1_2_4_N	<321..404	CDD:425360	11/49 (22%)
Hoxa4	NP_032291.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..70		4/27 (15%)
		PHA03247	<43..161	CDD:223021	26/126 (21%)
		Antp-type hexapeptide	159..164		1/4 (25%)
		Homeodomain	181..237	CDD:459649	43/55 (78%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	238..285		12/58 (21%)