DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Hoxa10

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_032289.2 Gene:Hoxa10 / 15395 MGIID:96171 Length:416 Species:Mus musculus


Alignment Length:306 Identity:86/306 - (28%)
Similarity:119/306 - (38%) Gaps:108/306 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTT 130
            |:|......||.||..|.|:||       :.|....::|..|                    |..
Mouse   142 QQQQQQPPPPPPQPPQPQPQAT-------SCSFAQNIKEESS--------------------YCL 179

  Fly   131 VEQVKKAPAVSTKVTASPAPSYDQEYVTVPTP-----SASEDVDYLDVYSPQSQ----------- 179
            .:...|.|..|.....:|.|       ..|.|     .||..|. :..|...||           
Mouse   180 YDAADKCPKGSAAADLAPFP-------RGPPPDGCALGASSGVP-VPGYFRLSQAYGTAKGFGSG 236

  Fly   180 ---TQKLKNGDFATPPPTTPTSLPPL-----------EGI--STPPQ---------SPGEK---S 216
               ||:|.: .|...||......||.           |.:  ||||.         |.|::   :
Mouse   237 GGGTQQLAS-PFPAQPPGRGFDPPPALASGSTEAAGKERVLDSTPPPTLVCTGGGGSQGDEEAHA 300

  Fly   217 SSAVSQEINHRIVTAPN----------------GAGDFNWSHIEETLASDCKDSKRTRQTYTRYQ 265
            ||:.::|::    .||:                |....||        ...|..::.|..||::|
Mouse   301 SSSAAEELS----PAPSENSKASPEKDSLGSSKGENAANW--------LTAKSGRKKRCPYTKHQ 353

  Fly   266 TLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            ||||||||.||.|:||.||::|:.::.|::||:||||||||||.||
Mouse   354 TLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 50/241 (21%)
Homeodomain 255..311 CDD:459649 33/55 (60%)
KLF1_2_4_N <321..404 CDD:425360
Hoxa10NP_032289.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..167 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..345 24/129 (19%)
Homeodomain 343..399 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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