DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Gsx2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus


Alignment Length:121 Identity:49/121 - (40%)
Similarity:66/121 - (54%) Gaps:17/121 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 PQSPGE--------KSSSAVSQEINHRIVTAP-NGAGDFNWS-----HIEETLASDCK---DSKR 256
            ||.||.        .:::|.:..:.|....|| ..|..:|.|     |......||..   :.||
Mouse   141 PQQPGSAAAAAAAAAAAAAAAAALGHPQHHAPVCAATTYNMSDPRRFHCLSMGGSDTSQVPNGKR 205

  Fly   257 TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKD 312
            .|..:|..|.||||:||..|.|::|.|||:||..|:|||:|:||||||||:|.||:
Mouse   206 MRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 12/52 (23%)
Homeodomain 255..311 CDD:459649 33/55 (60%)
KLF1_2_4_N <321..404 CDD:425360
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 4/9 (44%)
Homeodomain 204..260 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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