DRSC/TRiP Functional Genomics Resources

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Protein Alignment ftz and Barx2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_038828.2 Gene:Barx2 / 12023 MGIID:109617 Length:283 Species:Mus musculus


Alignment Length:211 Identity:55/211 - (26%)
Similarity:78/211 - (36%) Gaps:69/211 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 KYTPDYF-----YTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQT 180
            |.|.|||     |:....:...|......|.||:                     |..|...|  
Mouse    33 KETCDYFEKLSLYSVCPSLVVRPKPLHSCTGSPS---------------------LRAYPLLS-- 74

  Fly   181 QKLKNGDFATPPPTTPTSLPPLEGISTP-----PQSPGEKSSSAVSQEINHRIVTAPNGAGDFNW 240
                   ..|..||..:.|.|.....||     |.:..|.:::|..         .|.|      
Mouse    75 -------VITRQPTVISHLVPTGSGLTPVLTRHPVAAAEAAAAAAE---------TPGG------ 117

  Fly   241 SHIEETLASD----------CKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSE 295
                |.|||.          .|..:|:|..:|..|.:.|||:|...:|::...|:|:|.:|.|::
Mouse   118 ----EALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQ 178

  Fly   296 RQIKIWFQNRRMKSKK 311
            .|:|.|:||||||.||
Mouse   179 LQVKTWYQNRRMKWKK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 26/136 (19%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360
Barx2NP_038828.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..141 9/52 (17%)
Homeodomain 138..194 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..283
Blue background indicates that the domain is not in the aligned region.

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