DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ftz and Hoxb2

DIOPT Version :10

Sequence 1:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_598793.2 Gene:Hoxb2 / 103889 MGIID:96183 Length:354 Species:Mus musculus


Alignment Length:332 Identity:86/332 - (25%)
Similarity:125/332 - (37%) Gaps:82/332 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 IAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPS 163
            |..:..:||....|.:.|             .|.:..:..::.......|.|..:|.:.::...:
Mouse     9 IGFINSQPSLAECLTSFP-------------AVLETFQTSSIKESTLIPPPPPLEQTFPSLQLGA 60

  Fly   164 ASEDVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLE--------GISTPPQ---SPGEKSS 217
            ::       :..|.||.| ..:|.....||..|.:.|..|        ....|.|   ||...:|
Mouse    61 ST-------LQRPGSQKQ-AGDGPALRSPPPLPVAPPAPEFPWMKEKKSTKKPSQSAASPSPAAS 117

  Fly   218 SAVSQEINHRIVTAPNGAGDFNWSHIEETLASDC--KDSKRTRQTYTRYQTLELEKEFHFNRYIT 280
            |..:.|:.    :..:|.|           ..:|  ..|:|.|..||..|.||||||||||:|:.
Mouse   118 SVRASEVG----SPSDGPG-----------LPECGGSGSRRLRTAYTNTQLLELEKEFHFNKYLC 167

  Fly   281 RRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPE--------HCGAGYTAMLPPLEATS 337
            |.||::||..|.|:|||:|:||||||||.|:.......||        ...||..|..|.:....
Mouse   168 RPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPEGEPGGPSAQDDAGEPAEEPTVSPGD 232

  Fly   338 TAT-----------------TGAPSVPVPMYHHHQTTAAYPAYSHSHSHGYGLLNDYPQQQTHQQ 385
            .||                 .|||...:|........|:.|        |..:|....:|.....
Mouse   233 VATHRLREACFHPAEAAQGPRGAPPSALPATTLESVGASSP--------GCTMLRAGGRQSEPLP 289

  Fly   386 YDAYPQQ 392
            .||.|::
Mouse   290 EDACPER 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ftzNP_477498.1 FTZ 1..248 CDD:397787 28/159 (18%)
Homeodomain 255..311 CDD:459649 35/55 (64%)
KLF1_2_4_N <321..404 CDD:425360 18/89 (20%)
Hoxb2NP_598793.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..143 24/126 (19%)
Antp-type hexapeptide 92..97 1/4 (25%)
Homeodomain 142..198 CDD:459649 35/55 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 10/37 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..295 11/56 (20%)

Return to query results.
Submit another query.