Protein Alignment ftz and hoxd13

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: XP_002935723.1
• Gene: hoxd13 / 100498102
• XenbaseID: XB-GENE-482320
• Length: 300
• Species: Xenopus tropicalis
• Alignment Length: 281
• Identity: 71/281 - (25%)
• Similarity: 106/281 - (37%)
• Gaps: 84/281 - (29%)

  Fly   104 ERPST--LRALLTNP----VKKLKYTPDYFYTTVEQVKKAPAVSTK----VTASPAPS------- 151
            |.||:  .|..|::|    ....:..|...|:..::...|.|.:||    ..||..||
 Frog    21 EGPSSNQCRNFLSSPSVFGSPSSRTVPGLAYSAPDRSGSARAEATKEGPTCPASTGPSGPSLGYG 85

  Fly   152 --YDQEYVTV-----------PTPSASE------DVD-YLDVYSPQSQTQKLKNGDFATPPPTTP 196
              :...|.:.           |..|:|.      .|: |:||           :|..:|..|:..
 Frog    86 YHFGNGYYSCRMSHGVGLQQNPLKSSSHASLGGFPVEKYMDV-----------SGLASTSVPSNE 139

  Fly   197 TS-----LPPLEGISTPPQ------------SPGEKSSSAVSQEINHRIVTAPNG---------- 234
            .|     :...:|.:.|.|            |.||....|......::..|..||
 Frog   140 VSSRAKEVSYFQGYTNPYQHVPGYLDMVSTFSSGEPRHEAYISMEGYQSWTLANGWNGQVYCPKD 204

  Fly   235 ---AGDFNWSHIEETLASDCKD------SKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANA 290
               |..|..|.....:|.:..|      .::.|..||:.|..|||.|:..|::|.:.:|..|:.|
 Frog   205 QSQAPHFWKSSFPGDVALNQADMCVYRRGRKKRVPYTKLQLKELENEYAVNKFINKDKRRRISAA 269

  Fly   291 LSLSERQIKIWFQNRRMKSKK 311
            .:|||||:.|||||||:|.||
 Frog   270 TNLSERQVTIWFQNRRVKDKK 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	41/210 (20%)
		Homeodomain	255..311	CDD:459649	26/55 (47%)
		KLF1_2_4_N	<321..404	CDD:425360
hoxd13	XP_002935723.1	HoxA13_N	10..143	CDD:463521	28/132 (21%)
		Homeodomain	234..290	CDD:459649	26/55 (47%)