Protein Alignment ftz and hoxd9

DIOPT Version :10

• Sequence 1: NP_477498.1
• Gene: ftz / 40834
• FlyBaseID: FBgn0001077
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: XP_012826755.2
• Gene: hoxd9 / 100497640
• XenbaseID: XB-GENE-485791
• Length: 278
• Species: Xenopus tropicalis
• Alignment Length: 298
• Identity: 80/298 - (26%)
• Similarity: 115/298 - (38%)
• Gaps: 68/298 - (22%)

  Fly    45 SNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPPKATKRKAEDDAASIIAAVEERPSTL 109
            |||        |.:|...:..:|....:.....|.|||.|......::..:.|..:.....|::
 Frog     8 SNY--------YVDSLIGHEGEEGYGARFSQAGQNTTPRPSGDGDTSDFHSCSFASKSGVFPTS- 63

  Fly   110 RALLTNPVKKLKYTPDYFYTTVEQVKKA-------PAVSTKVTASPAPSYDQEYVTVPTPSASED 167
                              :|||:....|       |.|.....|:.:..|.......|..||:..
 Frog    64 ------------------WTTVQPQPAAGMTGIYHPYVGQSHLAADSGRYTVRSWLDPISSAAPS 110

  Fly   168 VDYLDV------YSPQSQTQKLKNGDFATPPPTTP----------TSLPPLEGISTPPQSPG--- 213
            ......      ..|:|..::.:...|.....|.|          |..||.:..:.|.:.|.
 Frog   111 FSGFPANGRNYGIKPESAAKRTECSSFGPQALTLPEYTCNSFPESTEKPPAKEPAAPSEEPNSTE 175

  Fly   214 -----EKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEF 273
                 |:......|:...:.:...|.|.  ||.|...|        ::.|..||:||||||||||
 Frog   176 LKEEKEQQQQQQQQQQQQQQLDPNNPAA--NWIHARST--------RKKRCPYTKYQTLELEKEF 230

  Fly   274 HFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK 311
            .||.|:||.||.::|..|:|:|||:||||||||||.||
 Frog   231 LFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ftz	NP_477498.1	FTZ	1..248	CDD:397787	42/233 (18%)
		Homeodomain	255..311	CDD:459649	36/55 (65%)
		KLF1_2_4_N	<321..404	CDD:425360
hoxd9	XP_012826755.2	Hox9_act	1..181	CDD:461369	34/199 (17%)
		Homeodomain	212..260	CDD:459649	29/47 (62%)